End-to-end Solution for Your RNA-Seq

Lexogen’s library preps powered by complimentary data analysis on Kangooroo

User-friendly

An intuitive data analysis experience. No bioinformatics or coding skills needed.

Fast and convenient

Get your data analyzed in just a few clicks within hours - not days or months.

Accessible anytime, anywhere

Kangooroo is a cloud-based web application. Just go online and start analyzing.

Interactive

Drill down into your data with interactive visualizations and investigate your data like an expert.

Proprietary data analysis pipelines

Data analyses pipelines developed specifically for Lexogen products and maintained by our bioinformatics team.

Secured and reliable

Your data is safe with us. We operate under GDPR and follow ISO27001 principles.

3' mRNA-Seq technologies

Single-cell 3' mRNA technologies

Whole transcriptome analysis

The whole transcriptome analysis pipeline includes Mix², a software that allows accurate estimation of transcript concentration from RNA-Seq data and offers exceptional reproducibility across variable conditions and accurate detection of differential expression on transcript and gene level. Learn more about Mix².

Each analysis pipeline includes Differential Gene Expression analysis with DESeq2.

Purchase a voucher code for data analysis on Kangooroo

Get a glimpse of Kangooroo interactive visualizations

Kangooroo contains several interactive plots, including PCA, MA and volcano plots. Explore your data in an engaging and user-friendly interface: zoom in and out, select specific datasets, adjust p-values, or hover over a data point in the chart to see detailed information about the selected data point.

Save costs on bioinformatics and analyze your data yourself on Kangooroo

The bioinformatics analysis of RNA-Seq data frequently comprises a hidden yet significant portion of the overall cost of your RNA-Seq experiment. Lexogen library prep kits contain voucher codes for free data analysis on Kangooroo, thus greatly reducing the cost of your RNA-Seq experiment.

Figure 1 | Data analysis represents a substantial portion of RNA-Seq expenses. Bar charts illustrate the cost distribution for RNA-Seq processed through either polyA enrichment whole transcriptome RNA-Seq (mRNA CORALL-Seq) or 3’ mRNA-Seq (QuantSeq) workflows. The typical cost for data analysis of differential gene expression by an academic core facility is approximately 20 € per sample. Even more notably, engaging a professional bioinformatics service or a commercial data analysis platform would likely double that cost. The approximate sequencing cost is based on a core facility price of the NovaSeq 6000 S1 flow cell – 3,5€ / M reads. 3’ mRNA-Seq concentrates reads on 3’ end and thus requires a significantly lower sequencing depth ~4M per sample compared to WT Seq ~30 M.

Kangooroo Tutorials Playlist

8 Videos